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Davide Di Ruscio
2025-06-05 22:03:17 +02:00
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type:: [[weblink]]
source:: [(93) Introduction to Nextflow for Data Intensive Pipelines: Part 1 - YouTube](https://www.youtube.com/watch?v=bIRLbYPWHoM&ab_channel=PawseySupercomputingCentre)
tags:: [[readingnotes]]
date:: [[21-01-2023]] - 17:13
- ![image.png](../assets/image_1674317591147_0.png)
- ![image.png](../assets/image_1674317686009_0.png)
- ![image.png](../assets/image_1674317796915_0.png)
- Processes are tasks to be performed
- it can be script, snippet of code, command line application etc.
- You need to specify input and output
- Each task gets its own directory in the filesystem
- In this way you avoid overwriting files, ar easy debugging
- ![image.png](../assets/image_1674318826828_0.png)
- ![image.png](../assets/image_1674320313220_0.png)
- ![image.png](../assets/image_1674320758137_0.png)
- type:: [[weblink]]
source:: [(94) [Nextflow DSL2] Running a remote pipeline using Docker - YouTube](https://www.youtube.com/watch?v=1km8tPMU5Vo&ab_channel=AndreaTelatin) [telatin/nextflow-example: A simple DSL2 workflow: tutorial (github.com)](https://github.com/telatin/nextflow-example)
[(94) Nextflow Training Workshop - July 2020 - Day 1 - YouTube](https://www.youtube.com/watch?v=8_i8Tn335X0&ab_channel=Nextflow)
tags:: [[readingnotes]]
date:: [[21-01-2023]] - 18:10
- ![image.png](../assets/image_1674322481681_0.png)
- ![image.png](../assets/image_1674322770788_0.png)
-